BoundingBoxSizeZ

Measure allowing to compute the size of the shape envelope along the z axis. More...

Classes
class	ipsdk::imaproc::shape::analysis::BoundingBoxSizeZMsr
	Measurement object for measure BoundingBoxSizeZ. More...
class	ipsdk::imaproc::shape::analysis::BoundingBoxSizeZMsrInfo
	Information object for measure BoundingBoxSizeZ. More...

Detailed Description

Measure allowing to compute the size of the shape envelope along the z axis.

This measure computes the size of the bounding boxes calculated for each shape along the z axis.

In the case of 2d images, the size along the z-axis is set to 0.

Here is an example of size along the z axis measurement :

See [Concept] Bounding Box 2d and [Concept] Bounding Box 3d for more details about the bounding box calculation.

Author

R. Abbal

Date

2015/07/15

Copyright

2015 Reactiv'IP, all right reserved.

Measure allowing to compute the size of the shape envelope along the z axis

Measure synthesis :

Measure Type	Measure Unit Type	Parameter Type	Result Type	Shape Requirements
Generic	Length	None	Value (ipsdk::ipReal64)	Boundary Approximation

See Shape measurement for additional information on these pictograms

Measure Type :

This is a generic measure

• it does not directly use shape or image data
• it can use dependencies to other measures to compute a result (see Measure Dependencies section)

This measure can be used in 2d and 3d case

Measure Unit Type:

Measure BoundingBoxSizeZ is associated to a length measurement unit [ipsdk::shape::analysis::eMsrUnitFormat::eMUF_LengthUnit]

Measure Parameter Type :

Measure BoundingBoxSizeZ has no parameters

Measure Result Type :

Measure BoundingBoxSizeZ is associated to ipsdk::shape::analysis::ValueMeasureResult<ipsdk::ipReal64> results

Measure Shape Requirements :

Measure BoundingBoxSizeZ requires boundary approximation from shape data

Measure Dependencies :

Measure BoundingBoxSizeZ depends on following measures :

Measure Mode	Measure Name	Measure Type	Measure Parameters
eMVP_2d	BoundingBox	BoundingBox2d
eMVP_3d	BoundingBox	BoundingBox3d

Note

See Shape Analysis 2d for more information on general shape 2d analysis and measurement usage.

See Shape Analysis 3d for more information on general shape 3d analysis and measurement usage.

Example of Python code :

Generic example in 2d case :

import PyIPSDK
import PyIPSDK.IPSDKIPLShapeAnalysis as shapeanalysis

    # Create the infoset
    inMeasureInfoSet2d = PyIPSDK.createMeasureInfoSet2d()
    PyIPSDK.createMeasureInfo(inMeasureInfoSet2d, "BoundingBoxSizeZMsr")
    
    #Perform the analysis
    outMeasureSet = shapeanalysis.labelAnalysis2d(inGreyImg, inLabelImg2d, inMeasureInfoSet2d)
    
    # save results to csv format
    PyIPSDK.saveCsvMeasureFile(os.path.join(tmpPath,  "shape_analysis_results.csv"), outMeasureSet)
    
    # retrieve measure results
    outMsr = outMeasureSet.getMeasure("BoundingBoxSizeZMsr")
    
    # retrieve measure values
    outMsrValues = outMsr.getMeasureResult().getColl(0)
    print("First label measurement equal " + str(outMsrValues[1]))

Generic example in 3d case :

import PyIPSDK
import PyIPSDK.IPSDKIPLShapeAnalysis as shapeanalysis

    # Create the infoset
    inMeasureInfoSet3d = PyIPSDK.createMeasureInfoSet3d()
    PyIPSDK.createMeasureInfo(inMeasureInfoSet3d, "BoundingBoxSizeZMsr")
    
    #Perform the analysis
    outMeasureSet = shapeanalysis.labelAnalysis3d(inGreyImg, inLabelImg, inMeasureInfoSet3d)
    
    # save results to csv format
    PyIPSDK.saveCsvMeasureFile(os.path.join(tmpPath,  "shape_analysis_results.csv"), outMeasureSet)
    
    # retrieve measure results
    outMsr = outMeasureSet.getMeasure("BoundingBoxSizeZMsr")
    
    # retrieve measure values
    outMsrValues = outMsr.getMeasureResult().getColl(0)
    print("First label measurement equal " + str(outMsrValues[1]))

Example of C++ code :

Example informations

Associated library

IPSDKIPLShapeAnalysis

Code Example

    // opening grey level input image
    ImagePtr pInGreyImg3d = loadTiffImageFile(inputGreyImgPath, eTiffDirectoryMode::eTDM_Volume);

    // read entity shape 3d collection used for processing
    Shape3dCollPtr pShape3dColl = boost::make_shared<Shape3dColl>();
    readFromBinaryFile(inputShape3dCollPath, *pShape3dColl);

    // define a measure info set
    MeasureInfoSetPtr pMeasureInfoSet = MeasureInfoSet::create3dInstance();
    createMeasureInfo(pMeasureInfoSet, "BoundingBoxSizeZMsr");

    // compute measure on shape 3d collection
    MeasureSetPtr pOutMeasureSet = shapeAnalysis3d(pInGreyImg3d, pShape3dColl, pMeasureInfoSet);

    // retrieve associated results
    const MeasureConstPtr& pBoundingBoxSizeZOutMsr = pOutMeasureSet->getMeasure("BoundingBoxSizeZMsr");
    const ipsdk::shape::analysis::ValueMeasureResult<ipsdk::ipReal64>& outResults = static_cast<const ipsdk::shape::analysis::ValueMeasureResult<ipsdk::ipReal64>&>(pBoundingBoxSizeZOutMsr->getMeasureResult());